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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2786687 chr1:245197731 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs2786688 chr1:245197657 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs2786689 chr1:245197623 A/C EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs2786919 chr1:245202933 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs2837257 chr21:41223196 A/C IGSF5 chr21:41117334-41174023:+ 0.56 5.06 5.64E-6 Box Plot
ACC rs2839603 chr21:44324506 C/T NDUFV3 chr21:44299754-44333414:+ 0.89 5.19 3.59E-6 Box Plot
ACC rs2842613 chr6:86305702 A/G SNHG5 chr6:86370668-86388454:- 0.75 5.84 3.38E-7 Box Plot
ACC rs28451373 chr14:65383442 C/A CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs28485832 chr8:124438882 G/C WDYHV1 chr8:124428965-124479470:+ 0.52 5.37 1.83E-6 Box Plot
ACC rs28494507 chr14:64386922 C/T SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs28498114 chr7:72281761 G/C TYW1B chr7:72023729-72298777:- 1.15 7.13 3.09E-9 Box Plot
ACC rs28505181 chr7:97483480 T/C TECPR1 chr7:97843936-97881563:- 0.79 5.23 3.12E-6 Box Plot
ACC rs28508270 chr14:65383555 C/T CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs28521730 chr4:39446058 C/A RPL9 chr4:39455744-39460568:- 1.05 10.36 3.06E-14 Box Plot
ACC rs28583954 chr14:64397409 C/T SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot